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New Mexico State University
College of Arts and Sciences
Department of Chemistry and Biochemistry

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 Mercury 200 NMR in Room 38

 

NMR 200

 Instrument

Location

Probe

Varian Mercury 200

Bldg 65 Room 38

5mm 1H/13C

This GemMercury NMRini 200 console was replaced on 10 November 2008 with a Varian Mercury console and a Blade Sun computer under Solaris 9 (Unix) with Varian's software VNRM 6.1C. It is equipped with a Narorac probe and is used primarily for carbon analysis; however, it is also useful for most 2D experiments as well as proton analysis. See the reservation protocol and the reset procedure after a power failure.

The Sun Blade has FTP capability. The browser Opera has been installed because Netscape can not be used. Netscape remains in the menu.

The MERCURY spectrometer provide superior control, stability, and performance for high-productivity. Surface-mount electronics enable a small footprint without compromising data quality. Modular design allows flexible configuration. Direct digital synthesis, linear amplifiers, and other innovative RF and digital technologies enable push-button operation. Optimized for walk-up operation. MERCURY delivers superlative performance for direct and indirect detection analysis of liquid. Advances in component technology pack more power in less space making MERCURY a compact high-resolution NMR spectrometer.

200 MHz Cutaway

A cutaway view of the Gemini magnet shown at the right was provided by Triangle Analytical.

The software for obtaining spectra uses the same protocols as the Unity 400. The window set up appears slightly different. When each users opens there account with a unique login name and password the VNMR software will be open along with a box on the right side of the screen which shows other software also minimized or open: terminal, file, and vnrm. Unlike the 400 MHz NMR the shim screen begin with fine Z1 and Z2 shim adjustments. Normally only the Z1C and Z2C coarse shims need to be modified for each sample.Mercury Back View

 

Special Procedures

 Shimming Values*

 * Shimming values for the Gemini are also kept in the Magnet Logbooks.

Listed below are [Commands (C), Macro Commands (M), Display (D), and Parameters (P)] which are the same as for the other Varian system:

Command
Type
Meaning
ai D absolute intensity  peaks are different heights  (opposite of nm)
aph D autophase
aph0 D autophase on the zero phase 
array M macro for setting a array
axis= C axis='p' display in ppm or axis='h' display in Hertz
best M Returns original best shims
calibrate M bring up calibrate menu
config M system configuration file  (for vnmr1 only)
df D display fid
dg  D display group  parameters
dg2 D display group 2 parameters
dgs D display group shims
dpf D display peak frequency
dpir D display peak integral region
ds D display spectra
ds(#) D display spectrum (#) of an array
dss D display stacked spectra  with manual settings
dssa D display stacked spectra with automatic spacing (up wards)
dssh D display stacked spectra horizontally (across)
f D display full spectrum
findpw(#) M macro for finding pulse width
ft C Fourier transform
full D display full screen
ga  C get acquisition 
go C get acquisition with wft
h2cal M calculates the GammaH2 
lp D left phase
lres2 M prints the "res" macros
lsn M list signal to noise   prints S/N; or dsn 
mtune M open sweep tuning menu
nl D nearest line
nm D normal mode all peaks same amplitude (opposite of ai)
page P sends plot data to printer/plotter
pap P plot all parameters
pl P plot spectrum
pdgs M Macro to print the current shim values
pl('all') P plot all spectra in array data
ppf D plot peak frequency
printoff P ends print run   
printon P start print run (all text is printed until a printoff command is sent)
pscale P plot scale
ra C resume acquisition
res M gives 50%, 0.55% and 0.11%  line widths in hertz
rl  D reference line
rp D right phase
sa C stop acquisition -- halts acq for modifications (e.g. more nt's)
setgcal M calculates the gauss per dac (grad cal) value
svf S save fid (to  /home/username/vnmrsys/data)
svs S save shims  (to  /home/username/vnmrsys/shims)
vo D vertical offset of stacked spectra
vp D vertical position of display
vsadj D largest peak to 80%
wft C weighed Fourier transform
wysiwyg D what you see is what you get  (full screen spectrum display)

When the system was not connected to the Internet nor was there RW CD but a 3 1/2 floppy drive then a USB (it must be FAT32) port could be used to save data. To save on a USB use the following commands, as root ( macro is available called usb which will type every thing but the stop and start commands).

Type: #/etc/init.d/volmgt stop

INSERT the USB drive and wait,

Type: #/etc/init.d/volmgt start

wait and wait

When open drag and drop the FID to the USB drive and type

Type: #/etc/init.d/volmgt stop

Type EJECT or select menu eject

The USB drive can be removed and the data processed elsewhere.


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